Protein Info for PGA1_c30080 in Phaeobacter inhibens DSM 17395

Annotation: Transglutaminase-like enzymes, putative cysteine proteases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 257 PF01841: Transglut_core" amino acids 33 to 135 (103 residues), 53.4 bits, see alignment E=1.5e-18

Best Hits

KEGG orthology group: None (inferred from 60% identity to mpt:Mpe_A1654)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7EQR0 at UniProt or InterPro

Protein Sequence (257 amino acids)

>PGA1_c30080 Transglutaminase-like enzymes, putative cysteine proteases (Phaeobacter inhibens DSM 17395)
MPDTRFLDVTPMLDSKAPAITALISERGWQRLSPHDRIGAAYDYVRDEILFGYNVADTRQ
ASLVLADGYGQCNTKATLLMAVLRALGIPCRLHGFTIDKSLQRGIVPELVYWMAPRSILH
SWVEVRLDAQWINLEGFILDQQVLGSLQAAFPGRTSLCAYGAGTDCLQAPMITWQGRDTY
IQRAGINADLGIFDSPDAFFGQHQQDLTGVRGWLYRNIIRHWMNRRVAAIRRGAVPTLPC
GDKGLKPDVPDRAFTDS