Protein Info for HP15_2905 in Marinobacter adhaerens HP15

Annotation: lipoprotein-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF18914: DUF5666" amino acids 46 to 101 (56 residues), 19.6 bits, see alignment 4.5e-08 amino acids 118 to 173 (56 residues), 23.8 bits, see alignment 2.2e-09 amino acids 192 to 250 (59 residues), 33 bits, see alignment 3.1e-12 amino acids 275 to 325 (51 residues), 49.1 bits, see alignment 2.9e-17 amino acids 335 to 400 (66 residues), 41.8 bits, see alignment E=5.3e-15

Best Hits

KEGG orthology group: None (inferred from 65% identity to maq:Maqu_3019)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PMF7 at UniProt or InterPro

Protein Sequence (486 amino acids)

>HP15_2905 lipoprotein-like protein (Marinobacter adhaerens HP15)
MNRKPLAIAVKLAMTGALAGALAACGGGGSGDASTSDASSGTSVGAVSGFGSVYVNGTRF
ETNGRVSSDDGLEREDQLEKGMILKVEGDWDDSGQGRADKVSYDDTLRGPISGMSWDEVT
RTGTLTMLGQSIALDGKTVFRGATPTALTDNPQGYRVRVSAWRLEDGSFRASFVGARAIG
LEFDDNNEVEIEGVVADLDTSAQTFTINGFLVDYTSAVGDDGFSLDDLANGIVVEVEGYL
DGNTIMAEEIDDEDDLFDDDDDVEISGSIYDYDAASGQFSVNGVRVQIDGGTEFDDLRES
SLADGLFVKVEGDFRNGVLVAEEIEGRDSDAELDGRIESLDLTNETMVVSGVQVQLTGNT
LIDDDDDDEDDRRSRVQDIQSLQVGDYLEIEGRQQSSDGGFLEAISIEREDDDDDDDFEL
EARVSAIGADSITIMNLEVLRNGYSLSGAQVGDEVEIGYRQTSGGLYELTENVEVDDSND
DSDSDD