Protein Info for PGA1_c29820 in Phaeobacter inhibens DSM 17395

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 354 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF03372: Exo_endo_phos" amino acids 50 to 329 (280 residues), 89.3 bits, see alignment E=1.6e-29

Best Hits

KEGG orthology group: None (inferred from 49% identity to sit:TM1040_3763)

Predicted SEED Role

"3-phytase precursor (EC 3.1.3.8)" (EC 3.1.3.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.3.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7EQN7 at UniProt or InterPro

Protein Sequence (354 amino acids)

>PGA1_c29820 hypothetical protein (Phaeobacter inhibens DSM 17395)
MRRLATLLLAALLPLISPAEADPAKTLRIASFNTELSRKGPGLLLRDLQRGKDPQVGAIL
QTLTEADADILVLQGIDWDHEGRSVIELRNLLAKRIPRYGHIYAARPNTGMQTRHDMDGD
GRLGTARDAQGYGRFTGQDGMAILSRLPILRVEVRDLSELLWQDLPGATLPTHPNGTSFP
SRDALAVQRLSTTGHWIVPILLPSGEQLSVMAFQATPPLFDGPEDRNGLRNQDEIRLWQV
LLDGGLGPTPIEPWVIVGGANLDPDKGAGRRTAIANLLRDPRLQDPRPPDAAGRTDTVNW
GTSGSMRVDYVLPSRALQVVASGLIWPAEITAKEGGADRPASRHALVWTDLQIQ