Protein Info for PGA1_c29660 in Phaeobacter inhibens DSM 17395

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 729 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF13449: Phytase-like" amino acids 444 to 706 (263 residues), 194.2 bits, see alignment E=2.4e-61

Best Hits

KEGG orthology group: None (inferred from 82% identity to sit:TM1040_2495)

Predicted SEED Role

"Alkaline phosphatase (EC 3.1.3.1)" in subsystem Phosphate metabolism (EC 3.1.3.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.1

Use Curated BLAST to search for 3.1.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7F089 at UniProt or InterPro

Protein Sequence (729 amino acids)

>PGA1_c29660 hypothetical protein (Phaeobacter inhibens DSM 17395)
MSTRLLCLTSALALTAGIAQADTSFNRIASFPVVQNMAAGEDITRESSPEIIDATADGMT
LVYTDSPLGALGLIDITDPANPAPKGNIALPGEPTSVAVVGTTAYVGVNTSKSYTQPSGL
LKAIDISTGAETGSCDLGGQPDSVAKSKDGAFLAVAIENERDEDLNDGLMPQMPAGNLVM
INTANGGLDCASMKVIGLTGLAEIASDDPEPEYVSINGLGETVVTLQENNHLVILSKDGK
VQNHFSAGAVDLEGIDATDERGALIFTESQEGRLREPDAVTWIDDNHFATANEGDYNGGS
RSWTIYNKDGTVVYDSGTSFEHAIVQIGHYPDKRSDAKGVEPESVTFAEFDGTPYVFVGA
ERASVVGVYDVTDPTNPVLTQLLPSGVGPEGYAVIPERGLLVSANEKDLIEDKGPRAHVM
MYELQNGAPTYPHLTSAGADELIGWGALSGIVADADGMIYAVNDSFYGFQPSIFKIDPSQ
TPARIVDVIRIHRQDGNPAQKLDLEGITLDGKGGFYVASEGRSDRVVPHAIYHVNKDGLI
KAKKGEIGLPAELMAVERRFGFEGITKVGDTLWMAVQREWKDDPKNHVKLVSYNLETKEW
GAVHYPKAEHDTGWVGLSEIVAHGDYVYVIERDNQHDFRAVTKKVYRVSLAEMTPAPLGG
PLPVVNKELVRDLLPDLKATGGYVLDKVEGLAITAEGEGFIVTDNDGIDDASGETMFFSI
GQMNTPTVN