Protein Info for Psest_2936 in Pseudomonas stutzeri RCH2

Annotation: Cyanate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 385 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details transmembrane" amino acids 43 to 63 (21 residues), see Phobius details amino acids 75 to 92 (18 residues), see Phobius details amino acids 98 to 121 (24 residues), see Phobius details amino acids 133 to 154 (22 residues), see Phobius details amino acids 166 to 183 (18 residues), see Phobius details amino acids 204 to 227 (24 residues), see Phobius details amino acids 241 to 261 (21 residues), see Phobius details amino acids 270 to 287 (18 residues), see Phobius details amino acids 293 to 314 (22 residues), see Phobius details amino acids 326 to 347 (22 residues), see Phobius details amino acids 359 to 378 (20 residues), see Phobius details PF07690: MFS_1" amino acids 23 to 319 (297 residues), 95.5 bits, see alignment E=1.6e-31

Best Hits

KEGG orthology group: K03449, MFS transporter, CP family, cyanate transporter (inferred from 92% identity to psa:PST_1434)

Predicted SEED Role

"Cyanate MFS transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GQ40 at UniProt or InterPro

Protein Sequence (385 amino acids)

>Psest_2936 Cyanate permease (Pseudomonas stutzeri RCH2)
MKFPSRGLLMVALVLAAINLRPGITSFAPLIERIAEELALSRGLISLTTALPVLLMGLLA
PLAPRLAVRFGLERSIALCLGLIAAALLLRLFGHSAALLIATAGLVGAGIAVAGPLLSGF
IKRYFLERMGQTAAWYSLSMAVGGTLGVVVTAPATEAMGQEWTRGLALWALPALAALLIW
LRLPNQPETANDSRAGLPWKEPRAWLLSIYFALQAGLFYALATWLVARYHEVGYSLLQSN
AFFSGFMLIGLPSAFAMPWLAQRLGNRHRIMAACGVLATLCLALIALLPGWQPLLVCMLL
GVALNGTFSLALISPMYEASTPLAVSRLTAMMLCTGYCLACLTPVLAGLGRDLAGDYRMP
FLVLTGMAACMSMLAMRLRSRHTGG