Protein Info for HP15_2601 in Marinobacter adhaerens HP15
Annotation: N-carbamoylsarcosine amidase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 54% identity to cwo:Cwoe_3971)MetaCyc: 40% identical to maleamate amidohydrolase (Brucella rhizosphaerae SJY1)
RXN-646 [EC: 3.5.1.107]
Predicted SEED Role
"N-carbamoylsarcosine amidase (EC 3.5.1.59)" (EC 3.5.1.59)
MetaCyc Pathways
- creatinine degradation II (2/5 steps found)
- nicotinate degradation II (1/5 steps found)
- nicotinate degradation I (1/6 steps found)
- picolinate degradation (1/7 steps found)
- nicotine degradation III (VPP pathway) (2/10 steps found)
- nicotine degradation II (pyrrolidine pathway) (2/11 steps found)
- superpathway of nicotinate degradation (1/18 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.5.1.107 or 3.5.1.59
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See E4PJK1 at UniProt or InterPro
Protein Sequence (196 amino acids)
>HP15_2601 N-carbamoylsarcosine amidase (Marinobacter adhaerens HP15) MALSSNVLKRGQRYALILVDLSVGFTDPSQSPLASESDDVVEANRVLLERFRERGWPVFF TTVAYSEPSQASVFREKLPALNVLEAGSGLVEMDSRLQPRSDEPVLVKHWASGFFGTDLD DRLKAAGVDGTVVTGLTTSGCVRATALDSLQHNYRTLIPREAVGDRDPDAHEANLRDLGI KYADVMSLSELLAFLD