Protein Info for Psest_2698 in Pseudomonas stutzeri RCH2

Annotation: benzoate 1,2-dioxygenase, small subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF13577: SnoaL_4
  • amino acids 4 to 101 (98 residues), 28.8 bits, E=1.1e-10
• TIGR03232: benzoate 1,2-dioxygenase, small subunit
  • amino acids 8 to 162 (155 residues), 293.5 bits, E=1.7e-92
• PF00866: Ring_hydroxyl_B
  • amino acids 14 to 154 (141 residues), 170.2 bits, E=2.9e-54

Best Hits

Swiss-Prot: 80% identical to XYLY_PSEPU: Toluate 1,2-dioxygenase subunit beta (xylY) from Pseudomonas putida

KEGG orthology group: K05550, benzoate 1,2-dioxygenase beta subunit [EC: 1.14.12.10] (inferred from 88% identity to psa:PST_1668)

MetaCyc: 80% identical to XylY (Pseudomonas putida mt-2)
Benzoate 1,2-dioxygenase. [EC: 1.14.12.10]

Predicted SEED Role

"Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)" in subsystem Benzoate degradation (EC 1.14.12.10)

MetaCyc Pathways

• benzoate degradation I (aerobic) (2/2 steps found)
• mandelate degradation to acetyl-CoA (9/18 steps found)
• meta cleavage pathway of aromatic compounds (3/10 steps found)
• toluene degradation IV (aerobic) (via catechol) (3/13 steps found)
• superpathway of aromatic compound degradation via 3-oxoadipate (11/35 steps found)
• superpathway of aerobic toluene degradation (7/30 steps found)
• superpathway of aromatic compound degradation via 2-hydroxypentadienoate (5/42 steps found)

KEGG Metabolic Maps

• Benzoate degradation via CoA ligation
• Benzoate degradation via hydroxylation
• Fluorobenzoate degradation

Isozymes

Compare fitness of predicted isozymes for: 1.14.12.10

Use Curated BLAST to search for 1.14.12.10

Sequence Analysis Tools

See L0GN34 at UniProt or InterPro

Protein Sequence (162 amino acids)

>Psest_2698 benzoate 1,2-dioxygenase, small subunit (Pseudomonas stutzeri RCH2)
MAISYEAVRDFLYREARYLDDKDWDSWLELYASDASFWMPAWDDNDELVENPQTEISLIW
YGNRGGLEDRVFRIRTERSSATIPDTRTSHNITNLEIVEQGEGFCKVRFNWHTMSFRYKT
VDHFYGTSFYTLDTRGESPLIKAKKVVLKNDYVRQVIDVYHI