Protein Info for Psest_2691 in Pseudomonas stutzeri RCH2

Annotation: benzoate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 401 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 47 to 65 (19 residues), see Phobius details amino acids 72 to 90 (19 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 124 to 146 (23 residues), see Phobius details amino acids 167 to 188 (22 residues), see Phobius details amino acids 212 to 235 (24 residues), see Phobius details amino acids 254 to 278 (25 residues), see Phobius details amino acids 290 to 314 (25 residues), see Phobius details amino acids 320 to 343 (24 residues), see Phobius details amino acids 351 to 381 (31 residues), see Phobius details TIGR00843: benzoate transporter" amino acids 4 to 384 (381 residues), 458.6 bits, see alignment E=9e-142 PF03594: BenE" amino acids 7 to 382 (376 residues), 524.5 bits, see alignment E=7.3e-162

Best Hits

Swiss-Prot: 50% identical to BENE_ACIAD: Benzoate membrane transport protein (benE) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: K05782, benzoate membrane transport protein (inferred from 94% identity to psa:PST_1675)

Predicted SEED Role

"Benzoate transport protein" in subsystem Benzoate degradation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GP91 at UniProt or InterPro

Protein Sequence (401 amino acids)

>Psest_2691 benzoate transporter (Pseudomonas stutzeri RCH2)
MKALLKDFSLSAVVAGFIATVISYAGPLVIIFQAAKAGNMPHDILSSWVWTISIGSGVLG
ILLSLRYKVPIIIAWSAPGSALLVTMLPDITLNEAIGAYIVTSVVVLLVGLSGAFDRIIN
RLPSAIAAGMLAGILFRFGTGLFVSIKEQPWLVLAMFCTYLIFKRAMPRYAVLAVLVVGV
TITIASGELRSEALVIGLATPVWINPEFSWQVMLNIAFPLIMVALTGQFVPGMAVLRNAG
YSTPASPLISSSALGSLLLAPFGCHGLNLAAITAAICTGREAHENPAKRYVAGVSGGVFY
LLLGIFGATLVSIFTAFPAALIAALAGLALLAAIGGALSAAMAVPDDREAALITFLVTAS
GMSFLGLSAAFWGLIFGIAAHLLLRLHPAWATAAKRQQTAR