Protein Info for Psest_0259 in Pseudomonas stutzeri RCH2

Annotation: cell division ATP-binding protein FtsE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 223 TIGR02673: cell division ATP-binding protein FtsE" amino acids 1 to 214 (214 residues), 287.2 bits, see alignment E=3.9e-90 PF00005: ABC_tran" amino acids 18 to 165 (148 residues), 126 bits, see alignment E=1.6e-40 PF13304: AAA_21" amino acids 106 to 200 (95 residues), 33.4 bits, see alignment E=5.3e-12

Best Hits

Swiss-Prot: 56% identical to FTSE_ECOLI: Cell division ATP-binding protein FtsE (ftsE) from Escherichia coli (strain K12)

KEGG orthology group: K09812, cell division transport system ATP-binding protein (inferred from 99% identity to psa:PST_3991)

MetaCyc: 44% identical to lipoprotein release complex - ATP binding subunit (Escherichia coli K-12 substr. MG1655)
RXN-22427

Predicted SEED Role

"Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)" in subsystem Bacterial Cell Division (TC 3.A.5.1.1)

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GHH8 at UniProt or InterPro

Protein Sequence (223 amino acids)

>Psest_0259 cell division ATP-binding protein FtsE (Pseudomonas stutzeri RCH2)
MIRFEQVGKRYPNGHVGLHELSFQVRRGEFLFVTGHSGAGKSTLLRLLLAMERPTSGKLL
LAGQDLSRITNSQIPFLRRQIGVVFQNHQLLFDRTVFDNVGLPLQILGLNKREIGQRVMT
ALERVSLKDKALQYPADLSTGQQQRVGIARAVVHRPALLLADEPTGNLDPRLAAEIMGVF
EDINRLGTTVLIASHDLALIARMRHRMLTLQRGRLIGDGEASR