Protein Info for HP15_2332 in Marinobacter adhaerens HP15

Annotation: secreted protein containing DUF1329

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 452 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF07044: DUF1329" amino acids 83 to 446 (364 residues), 449.3 bits, see alignment E=1.3e-138 PF17131: LolA_like" amino acids 340 to 414 (75 residues), 31.7 bits, see alignment E=1.2e-11

Best Hits

KEGG orthology group: None (inferred from 82% identity to maq:Maqu_2003)

Predicted SEED Role

"FIG002188: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PGI5 at UniProt or InterPro

Protein Sequence (452 amino acids)

>HP15_2332 secreted protein containing DUF1329 (Marinobacter adhaerens HP15)
MRSQLVAGVALVFLGFSGQALSKVTAAEAERLGGELTPVGAEKAGNRSGSIPEWTGGLAT
PPDGWREGQVEINPFPEDDALFVITSNNLELYRDKLSDGHIAMLEKYGPDFFMPVYQTRR
TAAFPEHVYDKFRENALTAQLLDNGNGVRDTIMTSSFPIPKNGLEVIWNHILRYRGEEIS
LRSASATPQRDGSYNPVVNDYDYFFAYSQRGAELAEIDNKIFYLKTDTVSPSSLAGTITL
VHETLDQVRSPRLAWRYDSGSRRLRRSPNLAYETDLPNSSSLRSVDQKDMYNGAPNQYDW
ELKGKRELFVPYNAYKLHGPEIEADDVIRPGHINQQLTRYELHRVWVVEAKRRTGISHIY
DRRVFYVDEDSWQILASEEYDAEGNLWRVSEAHNISYYSEPVFWTTMEMTYDLKAERYYV
DGLDNGFPAYDFAPGFRGNEFTASAARRAARR