Protein Info for PGA1_c02480 in Phaeobacter inhibens DSM 17395

Annotation: Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 445 PF04285: DUF444" amino acids 3 to 433 (431 residues), 535.7 bits, see alignment E=4.5e-165

Best Hits

Swiss-Prot: 52% identical to Y1398_RHIME: UPF0229 protein R01398 (R01398) from Rhizobium meliloti (strain 1021)

KEGG orthology group: K09786, hypothetical protein (inferred from 55% identity to pbr:PB2503_02607)

Predicted SEED Role

"FIG002076: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7ETI2 at UniProt or InterPro

Protein Sequence (445 amino acids)

>PGA1_c02480 Uncharacterized conserved protein (Phaeobacter inhibens DSM 17395)
MHHFIDRRANPKGKSLGNRQRFLKRARESIKERVDKSVKEKSIKDGGGVPAEGEKVTIPT
RGLKEPRFHHSSKGGRRRHVLPGNKEFIVGDTLKRPQGGAGEGGKQASEDGEGADEFSFT
LTRDEYLEILFDGLELPDLVEKATVETETIGTRRAGLTTAGTPNNLNLVRTMRNSLGRRI
ALQRPSVRSIAELKEQIAELEALTERTEAQDKILEELLHRMEVLERKRRVVGYIDPLDLR
YDTHVPEKIRNSRAVVFCLMDVSGSMQEREKDLAKRFFLLLHLFLTRSYEHTELVFVRHT
HHAQEVDEETFFYARETGGTIVSTALEKMKEIVAERYPPDEWNIYGAQASDGENFGNDSA
RCKALLLEDLLPVCQYYAYVEIVDENAEMLLNNPEAGEDLWQNYRQVKAQAPHFEMQRVS
QPSHIYPIFREFFLPKAKGAQNAGG