Protein Info for Psest_2395 in Pseudomonas stutzeri RCH2

Annotation: Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 319 PF04463: 2-thiour_desulf" amino acids 10 to 151 (142 residues), 144 bits, see alignment E=3.3e-46 PF08349: DUF1722" amino acids 194 to 310 (117 residues), 145.6 bits, see alignment E=7.8e-47

Best Hits

KEGG orthology group: None (inferred from 89% identity to psa:PST_1966)

Predicted SEED Role

"COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GM97 at UniProt or InterPro

Protein Sequence (319 amino acids)

>Psest_2395 Uncharacterized conserved protein (Pseudomonas stutzeri RCH2)
MHTTLPTPKIGISACLLGNPVRFNGGHKESRLCSETLAQHFEFIAVCPEVAIGLGTPREP
IRLVGQTDAPRAVGTVRPELDVTEALAAYGRQIAEQLQDISGYILMQKSPSCGMERVKVY
GSNGHTLPGGGAGVFAQALMQARPDLPVEEDGRLNDAVLRENFLTRVYAYADWQRLLQGG
ITRRAIVDFHSRYKYQLMASNPLQYRVLGRLVANIAERSLDEFASHYFSQMMQALKKPAT
RGTHCNVLLHLSGYLKDALGSEDRREMRHLIDQYRAGVIPLVVPLTLLKHHFRRHPDHYV
ARQAYLQPHPETLSLRNGI