Protein Info for HP15_2209 in Marinobacter adhaerens HP15

Annotation: 4-amino-4-deoxychorismate lyase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 272 TIGR03461: aminodeoxychorismate lyase" amino acids 12 to 258 (247 residues), 183.2 bits, see alignment E=2.6e-58 PF01063: Aminotran_4" amino acids 24 to 249 (226 residues), 147.6 bits, see alignment E=2.7e-47

Best Hits

KEGG orthology group: K02619, 4-amino-4-deoxychorismate lyase [EC: 4.1.3.38] (inferred from 56% identity to maq:Maqu_1864)

Predicted SEED Role

"Aminodeoxychorismate lyase (EC 4.1.3.38)" in subsystem Chorismate: Intermediate for synthesis of PAPA antibiotics, PABA, anthranilate, 3-hydroxyanthranilate and more. or Folate Biosynthesis (EC 4.1.3.38)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.3.38

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PFQ3 at UniProt or InterPro

Protein Sequence (272 amino acids)

>HP15_2209 4-amino-4-deoxychorismate lyase (Marinobacter adhaerens HP15)
MFRLFWADDGGLPANDRGLAYGDGLFETIRMSGQKGVLLSRHLERMARDAGRLGIEVSRK
ELASVCVEAGQRFADRFKGDGWVLKLTLTRGSGGRGYRPDPGMEPNLLVSASALPPTPDS
DGVAVDFSKVTLAVNPLLAGVKSLNRMEQVLAAAELKPSLFEVIMADREGNLVEGTRTNI
LLRQADGWVTPPASSLAVAGVLRQWLLERLRQRGEPVTERPVTVPDVLGPDCQGMFLLNS
VLGIVPVLTIAGHHLPVDSGLATIFNPLETLE