Protein Info for Psest_2226 in Pseudomonas stutzeri RCH2

Annotation: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 678 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 60 to 77 (18 residues), see Phobius details amino acids 89 to 109 (21 residues), see Phobius details amino acids 144 to 162 (19 residues), see Phobius details amino acids 182 to 200 (19 residues), see Phobius details PF00884: Sulfatase" amino acids 291 to 579 (289 residues), 147.9 bits, see alignment E=2.1e-47

Best Hits

KEGG orthology group: None (inferred from 73% identity to psb:Psyr_3506)

Predicted SEED Role

"Sulfatase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GJ31 at UniProt or InterPro

Protein Sequence (678 amino acids)

>Psest_2226 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily (Pseudomonas stutzeri RCH2)
MGWVRSRRLHYWFGAVGILFLTLAVLRGIFFVGFSGFEASALGDIDAVPETLGIGLRFDL
RLAILLMLPIALLAWLPKWNLIRSRTLRWLARLYLALALGAVLLVYIIDFGHYAYLGVRI
NATVLRFLEDAQISTDMVWQTYPVVWITLGWAAATALVWWLLLRIERVTLDRPARPISRL
SLIWGSTLMVAAVFVAILGRVDNINLENPVPLRWSDAFFSGDNQIAALGLNPVIFLYDTL
KVPNQPYDREQVEAHYDVVSRYLSVDQPDAKSLNFSREQGAQPYALAGKRPNVVFVMLES
LGTSAVGAYGNPLNPTPNIDRLAQQSWFFKNFYVPVTGTAKTVWASISGVPDVSRQETAT
RNPLITRQHSLINALQGYDKYYMIGGNSGWANMNALIRQSIDDIQLYEERHWKSPMVDVW
GVSDLDLFKESDRILREQGEGKPFFAYIQTAGNHRPFTIPKQNDGFEVRDLPLETVQGAG
SRSLAQYNAVRLLDFNIGRLMEIAQEGGWYDNTIFVMFGDHNTRISQIPHMPPAFEKLGL
ESNHVPLLIHAPKLLEPRVIEDAVGLADLLPTVLGMAGMEYRNGAMGRDIQQPAPEGERV
VPLVLREGTFPLIGGVTKDFLLQMQHDGSQPSLHDIASPEPLVDVAEQYPEEFQRLVKLT
RGLHETSRLMLYQNVRKD