Protein Info for HP15_1917 in Marinobacter adhaerens HP15

Annotation: glycosyl transferase, family 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 391 transmembrane" amino acids 6 to 31 (26 residues), see Phobius details amino acids 272 to 292 (21 residues), see Phobius details amino acids 298 to 317 (20 residues), see Phobius details amino acids 324 to 342 (19 residues), see Phobius details amino acids 348 to 366 (19 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 47 to 263 (217 residues), 52.1 bits, see alignment E=1.6e-17 PF00535: Glycos_transf_2" amino acids 51 to 189 (139 residues), 75.5 bits, see alignment E=1e-24 PF13506: Glyco_transf_21" amino acids 115 to 211 (97 residues), 26 bits, see alignment E=1.2e-09 PF13632: Glyco_trans_2_3" amino acids 132 to 335 (204 residues), 38.9 bits, see alignment E=1.8e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PQ01 at UniProt or InterPro

Protein Sequence (391 amino acids)

>HP15_1917 glycosyl transferase, family 2 (Marinobacter adhaerens HP15)
MSAILIATIVCFLVPAYVYIGFPLLLGILSLLKKPEEVATQPEDSLPSVTLVVSCFNEAD
VIEEKLSNSLELDYPEDRLTVLVVSDGSTDGTDEIVERFAGRGVQLIRQEGRLGKTMGLN
LAMDSVYSDITVFSDANAMYATDAVRQLVRHFQKRNVGYVVGAALYTDGEAGASAQNEGL
YWRYELAIKTMESRLSSVVGGDGAIYAIRSALWQPLDQKDINDFVNPLQIVLKGYRGVFE
PKAQCFEETAGEFDREIARKERIVNRSIRGLFRVRGVMNPFKTGLFSFMVISHKLLRWLI
PLFLALGGFGSLALSLFGLTVFKLIALGGALTLGLAAIGHFSSNKNALPIWISFPYYFVA
VNWYAVRGILRAIQGETQVTWDSARPGREGR