Protein Info for HP15_1865 in Marinobacter adhaerens HP15

Annotation: MaoC domain protein dehydratase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 161 transmembrane" amino acids 66 to 88 (23 residues), see Phobius details PF13452: FAS1_DH_region" amino acids 22 to 134 (113 residues), 26.6 bits, see alignment E=8.7e-10 PF01575: MaoC_dehydratas" amino acids 25 to 123 (99 residues), 85.4 bits, see alignment E=3.6e-28 PF03061: 4HBT" amino acids 74 to 133 (60 residues), 25.2 bits, see alignment E=2.4e-09

Best Hits

KEGG orthology group: None (inferred from 89% identity to maq:Maqu_1594)

MetaCyc: 54% identical to (R)-specific enoyl-CoA hydratase (Pseudomonas oleovorans)
RXN-7699 [EC: 4.2.1.119]

Predicted SEED Role

"enoyl-CoA hydratase, R-specific" in subsystem n-Phenylalkanoic acid degradation

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.119

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PPE2 at UniProt or InterPro

Protein Sequence (161 amino acids)

>HP15_1865 MaoC domain protein dehydratase (Marinobacter adhaerens HP15)
MSDTLDTLENITYDELNEGDTATFTRTLTEDELVLFAAVSGDVNPVHLDSEFAAGSMFKE
RIAHGMWSGSLISAALATVMPGPGTIYLEQSLSFKRPVKLDDTLTVHLKVLRKEPKGRVV
VECDVRNQNEQKVVIGEAKVIAPTEKVSLHKPRLPKIAIEH