Protein Info for HP15_1853 in Marinobacter adhaerens HP15

Annotation: phosphoadenosine phosphosulfate reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 240 TIGR00434: phosophoadenylyl-sulfate reductase" amino acids 18 to 232 (215 residues), 166.6 bits, see alignment E=7.2e-53 PF01507: PAPS_reduct" amino acids 29 to 207 (179 residues), 182.8 bits, see alignment E=3.1e-58 TIGR02055: adenylylsulfate reductase, thioredoxin dependent" amino acids 36 to 231 (196 residues), 268.3 bits, see alignment E=3.8e-84

Best Hits

Swiss-Prot: 68% identical to CYSH_PSEAE: Phosphoadenosine phosphosulfate reductase (cysH) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K00390, phosphoadenosine phosphosulfate reductase [EC: 1.8.4.8] (inferred from 86% identity to maq:Maqu_1582)

MetaCyc: 43% identical to assimilatory adenylyl-sulfate reductase (Allochromatium vinosum)
Adenylyl-sulfate reductase (glutathione). [EC: 1.8.4.9]

Predicted SEED Role

"Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)" in subsystem Cysteine Biosynthesis (EC 1.8.4.10, EC 1.8.4.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.8.4.10 or 1.8.4.8 or 1.8.4.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PPD0 at UniProt or InterPro

Protein Sequence (240 amino acids)

>HP15_1853 phosphoadenosine phosphosulfate reductase (Marinobacter adhaerens HP15)
MTDIQTLREELEGQSPRSILKAALQQYDNIAISFSGAEDVVLIEMAHKLTDNLKVFTLDT
GRLHPETYDFVERVRKHYGIEIEVLFPDAHEVQDLVNKKGLFSFYEDGHGECCGIRKVNP
LRRKLATVDAWITGQRKDQSPGTRNDVPVIQEDTAFSTNEKTLVKFNPLANWTSKEVWDY
IRMSEAPYNKLHEKGFVSIGCQPCTRPVLPGQHEREGRWWWEEATQKECGLHAGNLIARE