Protein Info for Psest_1833 in Pseudomonas stutzeri RCH2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 417 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 41 to 58 (18 residues), see Phobius details amino acids 68 to 89 (22 residues), see Phobius details amino acids 129 to 148 (20 residues), see Phobius details amino acids 167 to 186 (20 residues), see Phobius details amino acids 198 to 215 (18 residues), see Phobius details amino acids 220 to 253 (34 residues), see Phobius details amino acids 323 to 346 (24 residues), see Phobius details amino acids 353 to 373 (21 residues), see Phobius details amino acids 379 to 397 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 94% identity to psa:PST_2498)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GM19 at UniProt or InterPro

Protein Sequence (417 amino acids)

>Psest_1833 hypothetical protein (Pseudomonas stutzeri RCH2)
MTNFSSRFFFFPLLILAMVLHFSVFGDSPHNPYGIKGLNEVYLAVCIIFTILLLLASAED
APREFRILMYYCAYTSVVFLVMPAIFAYFTYGQPIVFGLIEERRVLACLGFAPLLFLGKR
VGTLQFERALLYAALIAAFFSWCFKFGVIPDMRPEVRSDDRPDRSSIGPYLICLAYFYCI
QIWSKGASPISGAARSKTLYLVIAAVLLLTLVFATQTRQLIVLCLAFTLFCLRAKAIIWA
ASLSILLSPFYFYPSLLEVLGFNTEFYDSTLEGVEDGARSVTISLIFAHLDQVNWLPSGS
LSLMWQDGFIPYFGEHFFLSDVGIIGTLFRFGFLTFLIIPMTLFVYHRIAKNIATDMTFI
YATMLAFFVIWPLNGLFEYGQPVIAMLFVIHALRARHLRSQETIHERRAYPQLQGSY