Protein Info for HP15_1743 in Marinobacter adhaerens HP15

Annotation: conserved hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 834 PF27160: Y4kK_N" amino acids 44 to 158 (115 residues), 32.1 bits, see alignment E=1.3e-11 PF00082: Peptidase_S8" amino acids 283 to 618 (336 residues), 172.6 bits, see alignment E=1.2e-54

Best Hits

KEGG orthology group: None (inferred from 56% identity to sbm:Shew185_4275)

Predicted SEED Role

"putative serine protease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PNL3 at UniProt or InterPro

Protein Sequence (834 amino acids)

>HP15_1743 conserved hypothetical protein (Marinobacter adhaerens HP15)
MPRIKDGRQHIILGSTGKPEKYTYPRKVVTAKNVPQRNRMEQAASLSSQLNRVKESKPAI
VREAEQYELESSIGLQVTFDSFPGVELAFESLADSRQKLELLNVRYHDDKVTATVFVPID
KIGFFEKKIKDYLEGRKDRKGGPRDNRTLIDAIESIRESAFNELWNDDDSALPTDGQQEI
WWEIWLPVLDDRTAVVHDFKKVAVSIGIEVSDSTLEFPERTVLLAHCTKSKLSQSSLLMS
KISEIRRAKETAEFFDAMGREEQTEWVTELLERTKFTNNENSPFICVLDSGINSGHPLIS
PVLDSDDRHVIDPSWIINDEDGHGTGMSGLSVWGDLTTALETTEDLEVNWRLEGVKLIRS
PGDNKGRHHGVITAEGVSLPEIQAFDRNRVYVMALSATDSRDRGRPSAWSSTIDSLCSDY
LGENRFPRLMLVCAGNTGDDLTELMGYPSHNELQDIHDPGQAWNAITVGGYTRKVVIDDL
GADNYEPVAPNGGLSPYSTTSLTWENSMPIKPEVVFEAGNVGRIISCAGLNSLKLLTTNH
DISERHFSTFEATSAATALAANFSAKILHEYPNLWPETVRALMIHSAEWTDAMTEQFTDP
KKTDKHNAKRLARCVGFGAPSVNRALSSLKNSVVMVVEDHIQPFEKKKGKSPSTKDMNLH
ELPWPKDLLASLGDTEIRMTVTLSYFVEPNPSSRNVSSKYRYPSHQLRFDVKRPTESTDA
FKARMSRAAQSAEQGNSTVGNGDPNWLFGEYRHRGSIHKDVWRGSAIELSERGVIAVYPA
MGWWRTRTKLESFNKTARYALIISIEAPEVDTDIYNEIQTIIESTVETEVRIHN