Protein Info for PGA1_c17240 in Phaeobacter inhibens DSM 17395
Annotation: Uncharacterized protein conserved in bacteria
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K09781, hypothetical protein (inferred from 71% identity to sil:SPO2197)Predicted SEED Role
"Membrane protein, putative"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See I7E134 at UniProt or InterPro
Protein Sequence (316 amino acids)
>PGA1_c17240 Uncharacterized protein conserved in bacteria (Phaeobacter inhibens DSM 17395) MSGLLALLDDVAAIAKVAATSVDDVAAAASKAGAKTAGVIIDDAAVTPKYLQGFAPAREL PIIWRITRGSLFNKLILLLPVAMLLANFAPWLITPLLMLGGSYLCFEGAEKIFHVLFPHA SHEIEQDMSVKDPGHLEEQKIKGAIKTDFILSAEIMTIALAAIEAPNVWMQAATLAVVAI GVTLAVYGSVAVIVKMDDVGLYLAGNAPTPIGRGLGRGLVKFMPVLMWILSVVGTAAMLW VGGSIIIHGLEVLGFGWLGHHIHDWAYAVGHAVPAAWTGFAEWSAKAAMDGVFGVVWGLL LIPLATKVVGPLLSKF