Protein Info for HP15_1457 in Marinobacter adhaerens HP15

Annotation: HAD-superfamily subfamily IB, PSPase-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 79 PF07238: PilZ" amino acids 8 to 76 (69 residues), 39.3 bits, see alignment E=3.4e-14

Best Hits

KEGG orthology group: None (inferred from 77% identity to maq:Maqu_1093)

Predicted SEED Role

"type IV pilus assembly PilZ"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PKC4 at UniProt or InterPro

Protein Sequence (79 amino acids)

>HP15_1457 HAD-superfamily subfamily IB, PSPase-like protein (Marinobacter adhaerens HP15)
MSAKVKVVHEELGEFIFSTRDISDGGVFIVVDTEPFAPNLGDTVTVQVQGLPVPAPVLEM
VVVRKTNDGYGLQFDQNGD