Protein Info for PGA1_c01530 in Phaeobacter inhibens DSM 17395

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 391 signal peptide" amino acids 1 to 15 (15 residues), see Phobius details transmembrane" amino acids 200 to 218 (19 residues), see Phobius details amino acids 314 to 347 (34 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7DL91 at UniProt or InterPro

Protein Sequence (391 amino acids)

>PGA1_c01530 hypothetical protein (Phaeobacter inhibens DSM 17395)
MFLIAPWWVYAAAAAGFLYLSEQVYQNELKEQADATAALAQPVPGRVDLSAFDRQSDVGL
ADEVHIGGWINTDFNYHLRKTKKGSVRTEGYMYVLQGAADTSSTKQVRAIILMSEREKAD
FISRISEFQVPGKLDETGHSYFAFNGVRTNAGSFSDLVKDAFKEQGLTKGPDFIVVEPFW
EGREKGLTYAGDPQRLRGKLWKLSGVLLVLAAIKFGLARRSKQRQSERDAASVERAIFAS
SPIASAGEKGARFGRPDPGVSQPKTLRQTAARVQKTLPERPSPELQSEEEGEAHGLAKAG
FMRRFTQLSRKSQMILLGMVFILPFCVMKPAFGGMVLPVVFMVYIYWSIGAKAATSVRKA
LEEVGLLKPRISRLAKQDPFSRLEAQARNVR