Protein Info for Psest_1342 in Pseudomonas stutzeri RCH2

Annotation: Protein kinase domain.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 517 transmembrane" amino acids 296 to 320 (25 residues), see Phobius details PF00069: Pkinase" amino acids 11 to 257 (247 residues), 164.1 bits, see alignment E=6.4e-52 PF07714: PK_Tyr_Ser-Thr" amino acids 13 to 231 (219 residues), 108.6 bits, see alignment E=5.2e-35 PF03109: ABC1" amino acids 79 to 157 (79 residues), 23.3 bits, see alignment E=4.8e-09

Best Hits

KEGG orthology group: None (inferred from 88% identity to psa:PST_2952)

Predicted SEED Role

"serine/threonine protein kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GKH2 at UniProt or InterPro

Protein Sequence (517 amino acids)

>Psest_1342 Protein kinase domain. (Pseudomonas stutzeri RCH2)
MTHRMLEIPGYRLHKRLGKGGMAEVYLATQLSLDREVAVKVLLRTEDAAFTERFIQEGHI
VASLRHPAIITIHDIGQIADGRHYLAMEYIGGGDLAQHRGIVFSPSRALDIIRQLAGGLA
VVHDGGLVHRDVKPANILFRDDGSVVLTDFGVAKSVELDNELTHFGIAVGSPAYSSPEQA
QCQPLDARSDIYSLGVILAEMLTGTNPFRASSYPQTVLNHLQMPIPLLPPALAPYQPLLD
RMLAKQPAERFASCRELLAAIDTLTEPDMDQTRIAPALLMEPQAQPRRRRQRRAIGRWAT
VAAVLALAIGALGVGGYQWFQYSQISEFLTRAESRLGEGQLTAPAYDNADYYFRQALRLD
ADNAEALDGLRRVLDARIAQALKLAAQRLADDQLLEPAEDSAVHYYQQVLGWLPEHQVAR
DGLARVSERYVELAEAAYGRREYALALEYIEQGLEASPAYAPLLALHDAHAQRVAKARAP
RPVPRTAASSSRTPPATTQTSQAPANPVKRLWNRIFN