Protein Info for EX31_RS07110 in Rahnella sp. WP5

Annotation: sulfurtransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 539 PF00581: Rhodanese" amino acids 18 to 113 (96 residues), 33.1 bits, see alignment E=3.3e-12 amino acids 143 to 235 (93 residues), 39.3 bits, see alignment E=3.8e-14 amino acids 279 to 360 (82 residues), 35.3 bits, see alignment E=6.7e-13 amino acids 389 to 478 (90 residues), 29.7 bits, see alignment E=3.6e-11

Best Hits

KEGG orthology group: None (inferred from 99% identity to rah:Rahaq_2234)

Predicted SEED Role

"Rhodanese-related sulfurtransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (539 amino acids)

>EX31_RS07110 sulfurtransferase (Rahnella sp. WP5)
MTDSYSLPLRHFSELREALLEGQDVALVDLREEAAFATGHPLFAANLALSKLELEVLDRI
PNRLTAITLYDNGEFYDVQRGERKTMRAAQLLKSLGYQNIALLAGDLAGWKEAGGEIFID
VNAPSKAFGEWVEHHYETPSLSAEQVLALQQQGANIAVLDVRRFDEYQVMSIPGGVSVPG
GELVLRLKDVVPDDHTQVIINCAGRTRSIIGAQSLINAGFTQPVSALRNGTIGWTLAGQA
LSHLQHKQFPALSEASRRVALKGAQTLALRAGVRSVTLSQLRDWQQDDSRTLYVFDVRTA
EEFRAGHLAGTRHVPGGQLVQETDHYASVRGARIVLVDNDGVRARMAASWLAQMNWEVYI
AEVRAEDLTEQGDWKARVAPAPAVESVKPEQLLNWLSEGNTGILDLTTSANFRNRRIPGA
VWTTRGNIPQIIALQPQKARWVVTCTSGLLARYAVTEVAGLTGKPVYLLEKGTVGWIDHG
LLLERGDSVYLDDAQDRYRRPYEGTDVSPQAMQDYLDWEYGLVGQLEKDGTHGFRLLEA