Protein Info for Dsui_3445 in Dechlorosoma suillum PS

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 548 transmembrane" amino acids 42 to 63 (22 residues), see Phobius details amino acids 103 to 124 (22 residues), see Phobius details amino acids 136 to 154 (19 residues), see Phobius details amino acids 161 to 177 (17 residues), see Phobius details amino acids 188 to 217 (30 residues), see Phobius details amino acids 230 to 252 (23 residues), see Phobius details amino acids 277 to 296 (20 residues), see Phobius details amino acids 312 to 332 (21 residues), see Phobius details amino acids 339 to 357 (19 residues), see Phobius details amino acids 363 to 386 (24 residues), see Phobius details PF13231: PMT_2" amino acids 83 to 247 (165 residues), 66.1 bits, see alignment E=2.2e-22

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QKN5 at UniProt or InterPro

Protein Sequence (548 amino acids)

>Dsui_3445 hypothetical protein (Dechlorosoma suillum PS)
MAEHDSPAPTETPAPTETGTDTSTRALLGPGHFLARLPMHRLVLGVAAALLLFRTWLAAV
TPITGDEAYFAFWGWQPDWGFYDHPPMVGWWLAPLMALSWDEWVVRLPALLLPFVLAGLS
GWLVRRSGIAFAEERGWLTALLVLLLPTSVWNVFITTDTPLVFFSLLSVAAYVVALERQG
WQRWALHALAGLMLGLAFLSKYFSVLLGVAFLVHVIVARREEGWKRFAEFALFVAVALLG
PALNIWWNCSHCWANIMFNLYNRHESSGWGKSWANPFLYVLTLGYVATPFLLAALWKFRD
EVKNAIAQPGLARTAFWLAAVPLGLFAALALAKKIGLHWLLSFITLLCILAASSLPMTAL
RRLAAWLGGFAALHVVLLLVVSQLPLSTWEKADFHRGLVLTFRSQELLQRLEPYANDYAF
ASDGYSNAVTLGYNARRYFMVFGLASSHARHDDILTDFRELDGKNILILRKSEPNPGEYA
PYFRDVQQLAFQVEGVTFYQVLGHGFDFHTYRERVLRDVKQRYYRIPGFLPMNGCYFCER
YFPDEECR