Protein Info for Dsui_3434 in Dechlorosoma suillum PS

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 85 PF09857: YjhX_toxin" amino acids 1 to 85 (85 residues), 137.8 bits, see alignment E=4.7e-45

Best Hits

Swiss-Prot: 73% identical to Y3746_HAHCH: UPF0386 protein HCH_03746 (HCH_03746) from Hahella chejuensis (strain KCTC 2396)

KEGG orthology group: K09982, hypothetical protein (inferred from 72% identity to esc:Entcl_3818)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QKM4 at UniProt or InterPro

Protein Sequence (85 amino acids)

>Dsui_3434 hypothetical protein (Dechlorosoma suillum PS)
MNLSKPEQRTLHVLAKGGHIEHHRDASGRITHVDCYTREGFVLSDCTLPVFKKLKAKRLI
ASLDGRPYRINRAGLGAVRGQLDNQ