Protein Info for Dsui_3261 in Dechlorosoma suillum PS
Annotation: 6-phosphofructokinase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 66% identical to PFP_HALED: Pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfp) from Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
KEGG orthology group: K00850, 6-phosphofructokinase [EC: 2.7.1.11] (inferred from 77% identity to dar:Daro_3204)Predicted SEED Role
"6-phosphofructokinase (EC 2.7.1.11)" in subsystem D-Tagatose and Galactitol Utilization or Glycolysis and Gluconeogenesis or Glycolysis and Gluconeogenesis, including Archaeal enzymes or N-Acetyl-Galactosamine and Galactosamine Utilization (EC 2.7.1.11)
MetaCyc Pathways
- superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass (22/26 steps found)
- superpathway of anaerobic sucrose degradation (16/19 steps found)
- superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle (18/22 steps found)
- glycolysis II (from fructose 6-phosphate) (10/11 steps found)
- glycolysis I (from glucose 6-phosphate) (11/13 steps found)
- homolactic fermentation (10/12 steps found)
- glycolysis III (from glucose) (9/11 steps found)
- glycolysis IV (8/10 steps found)
- sedoheptulose bisphosphate bypass (2/2 steps found)
- hexitol fermentation to lactate, formate, ethanol and acetate (14/19 steps found)
- formaldehyde assimilation II (assimilatory RuMP Cycle) (6/9 steps found)
- superpathway of hexitol degradation (bacteria) (12/18 steps found)
- superpathway of glycolysis and the Entner-Doudoroff pathway (11/17 steps found)
- galactitol degradation (2/5 steps found)
- D-galactosamine and N-acetyl-D-galactosamine degradation (1/4 steps found)
- 1,3-propanediol biosynthesis (engineered) (4/9 steps found)
- N-acetyl-D-galactosamine degradation (1/5 steps found)
- lactose degradation I (1/5 steps found)
- superpathway of N-acetylneuraminate degradation (13/22 steps found)
KEGG Metabolic Maps
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of alkaloids derived from terpenoid and polyketide
- Biosynthesis of phenylpropanoids
- Biosynthesis of plant hormones
- Biosynthesis of terpenoids and steroids
- Fructose and mannose metabolism
- Galactose metabolism
- Glycolysis / Gluconeogenesis
- Pentose phosphate pathway
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.1.11
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See G8QJC4 at UniProt or InterPro
Protein Sequence (422 amino acids)
>Dsui_3261 6-phosphofructokinase (Dechlorosoma suillum PS) MAVKNAFYAQSGGPTAVINASACAVIETARAHPDKIGKVFAGRNGIVGALTEDLIDTSLE SPADIARLRTTPGAAFGSCRYKLKSIEEHRAQYERLIEVCRAHDIGYFFYNGGNDSMDTA WKVSQLSEKMGHPLICVGVPKTVDNDLPLTDCCPGFGSVAKYVATSIREAGLDVASMART STKIFVLEVMGRHAGWITAACGLASGAGTDSGQPPHILLFPEVPFDEAAFLARVQQCVDR YDYCTIAVSEGLKTADGKFVSEQGGKDAFGHSQLGGAGQWIAQLIKDKLGHKYHWALADY LQRAARHIASKTDADQAYALGKAAVELAVAGRNAVMPTVVRLADAPYRWEVGVAELKDVA NVERKMPADFISADGFHITDKCRAYLAPLIEGEDYPPYRHGLPDYVSLKNIAVPRQLGEF KV