Protein Info for Dsui_3157 in Dechlorosoma suillum PS

Annotation: Fatty acid cis/trans isomerase (CTI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 783 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF06934: CTI" amino acids 98 to 782 (685 residues), 859.1 bits, see alignment E=1.5e-262

Best Hits

KEGG orthology group: None (inferred from 49% identity to vpa:VPA0677)

Predicted SEED Role

"Fatty acid cis/trans isomerase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QIM9 at UniProt or InterPro

Protein Sequence (783 amino acids)

>Dsui_3157 Fatty acid cis/trans isomerase (CTI) (Dechlorosoma suillum PS)
MQLRFASVLLLFLAGCTALVRHDLDQRFGPADGGRYDAPRPGAISFQQQVRPILDSRCVV
CHSCYDAPCQIKLGSWEGVARGGSKIEVYNGTRLREETPTRLFIDAEKASQWRDKGFHPI
LNERGDTPAAALQASLLARALDLKAAHPLVPEQPVGGDIDFSLARQQSCPAIEEYDALER
RNPGWGMPFGLPALAPAEVALLKKWLQQGAPAEGPQPLTPALQAQVDAWERFLNGADLKT
RLMARYLYEHLFLANLYFEGAAEGSDGPRYFRLVRSRSAPGEAVQEIATRRPFDDPEVEH
FHYRLRPVEETIVAKNHMPYALGPGRMARWRELFLQPAYRVERLPGYAPEVAANPFLAFR
DIPVRARYQFLLDEAQFTVMGFIKGPVCRGQTALNVIDDHFWVFFQNPDSVSESDEAFLL
RESRNLSLPAEKGSETPILTPWMRYSAQETRYLQAKSRYYEQRFDSPAKVNLNLIWDGGG
RNDNAALTIYRHFDSATVLKGLVGEKPKTAWVLSYPLLERIHYLLVAGYDVFGNIGHQLT
TRLYMDFLRMEGESQFLMLLPREARIRVRDHWYRDVNGDTRERVYGSIARFDQESGIAYR
DREHPELELLQRLQQRLQPVLPQQHLLDALPETGLQADLQALARVAGKPLAWLPESSLLL
VEEAGRPAKIFTLLRNTGHRNVTYVLIEKLAIAPEEHSLDVLTGIATAYPNAFYRVPRAS
LGAFARDLAALASERDYTRFMDTYGLRRSSPDFWALSDYVNGEYRRQAPIEAGWLDYNRL
ENR