Protein Info for Dsui_2766 in Dechlorosoma suillum PS

Annotation: putative homoserine kinase type II (protein kinase fold)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 335 PF01636: APH" amino acids 38 to 272 (235 residues), 104 bits, see alignment E=5.7e-34

Best Hits

KEGG orthology group: None (inferred from 70% identity to cvi:CV_1007)

Predicted SEED Role

"YihE protein, required for LPS synthesis"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QQ06 at UniProt or InterPro

Protein Sequence (335 amino acids)

>Dsui_2766 putative homoserine kinase type II (protein kinase fold) (Dechlorosoma suillum PS)
MPETQAPPPYASLTPDAVLDALESLGLLPDGRQLALNSYENRVYQLWLDEPLAGHNIVVA
KFYRPGRWSDGAILEEHAFTRELAEREIPVVAPLEIGGRTLHHSGEHRLALFPRRGGRAP
ELSDPDTLEWLGRFIARIHAVGALAPYRERPALTLHSFGEEPRDFLLAGGFVPPELKNAW
EGTVNVALDGARRCFERAGDVASLRLHGDCHMGNVLWTDAGPHFVDFDDSRTGPAIQDLW
MLLSGDRREQQRQLDDVLAGYRDFMDFDPRELHLVEALRTLRLVHYSAWLARRWNDPAFP
AAFPWFGSQRYWEERILELKEQIALMDEGPLELFG