Protein Info for Dsui_2740 in Dechlorosoma suillum PS

Annotation: putative integral membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 245 transmembrane" amino acids 32 to 49 (18 residues), see Phobius details amino acids 55 to 77 (23 residues), see Phobius details amino acids 105 to 130 (26 residues), see Phobius details amino acids 151 to 177 (27 residues), see Phobius details amino acids 185 to 233 (49 residues), see Phobius details PF09955: DUF2189" amino acids 60 to 177 (118 residues), 84.9 bits, see alignment E=2.8e-28

Best Hits

KEGG orthology group: None (inferred from 34% identity to aeh:Mlg_1270)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QPY0 at UniProt or InterPro

Protein Sequence (245 amino acids)

>Dsui_2740 putative integral membrane protein (Dechlorosoma suillum PS)
MAIQPRRLRLAHLGAALASGGRTFARNPGPSALLALPLAVVGVLIWLILGQAAVAPLALA
ASGGFMLVGPLLLVGYFELADRSARGEAAPAALAFTAYRRAPTGLWAIGAVCTFFYLIWI
TDAATLYGFMVGGEPRGLATLLSPGTDVQAFLRWSSLMGAVLAFMIYAVTAFAVPLLHYG
RANLIQAVVLSVRAVFGNFLLALLWGVLLAAGVIGSILLLFPFPLVFPLLAYASHALYQQ
VFPLE