Protein Info for Dsui_2669 in Dechlorosoma suillum PS

Annotation: ankyrin repeat-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 248 transmembrane" amino acids 25 to 43 (19 residues), see Phobius details amino acids 55 to 84 (30 residues), see Phobius details amino acids 100 to 122 (23 residues), see Phobius details PF12796: Ank_2" amino acids 118 to 200 (83 residues), 37.7 bits, see alignment E=6.5e-13 PF13637: Ank_4" amino acids 140 to 192 (53 residues), 28.7 bits, see alignment E=3.4e-10 amino acids 175 to 224 (50 residues), 32.1 bits, see alignment 2.9e-11 PF00023: Ank" amino acids 172 to 200 (29 residues), 22.5 bits, see alignment (E = 2.8e-08) amino acids 204 to 224 (21 residues), 17.6 bits, see alignment (E = 9.6e-07) PF13606: Ank_3" amino acids 172 to 198 (27 residues), 19.8 bits, see alignment (E = 2e-07)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QPB8 at UniProt or InterPro

Protein Sequence (248 amino acids)

>Dsui_2669 ankyrin repeat-containing protein (Dechlorosoma suillum PS)
MPDNFVKYFTQVIAMDQFEARRRREWMLVGLVLLLAVLANLPHDLSQALHLNTNYLVAVL
GLMVLLALFLYVRFTFFLLYALLVVGANLPDQWADGLGVSRMPLLIALGFMVAGSLVNQV
TRLVPSGLEPKPKVKSSEGTRALCGAVERNNLSLARRVLAMEIDPNQMDEQGRLPLAMAA
MNGHLPLVQALLQAGANPTQAAGDGQTALMLAQQHGHAEVVSALRETLKDRQDDEMPRLN
PDSSFIRT