Protein Info for Dsui_2429 in Dechlorosoma suillum PS

Annotation: putative permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 379 transmembrane" amino acids 14 to 34 (21 residues), see Phobius details amino acids 39 to 63 (25 residues), see Phobius details amino acids 70 to 96 (27 residues), see Phobius details amino acids 107 to 123 (17 residues), see Phobius details amino acids 156 to 180 (25 residues), see Phobius details amino acids 220 to 249 (30 residues), see Phobius details amino acids 251 to 273 (23 residues), see Phobius details amino acids 282 to 303 (22 residues), see Phobius details amino acids 315 to 342 (28 residues), see Phobius details PF01594: AI-2E_transport" amino acids 25 to 345 (321 residues), 120.5 bits, see alignment E=4.6e-39

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLZ9 at UniProt or InterPro

Protein Sequence (379 amino acids)

>Dsui_2429 putative permease (Dechlorosoma suillum PS)
MSPVVRPFPRQPRAAGPLVWACILGTTCLLLFLFQKILWLVVPFILALIIYYALLPAVLR
LVLAGYSVTAGASLVCFGAFLLLGGALGLAAPWIAAHAVSWNEWGGRYLAGGVGFVLGSL
SSLENSFEFLAQAHLTDSVRKGISDFSANFVSRNLAGAVMLAAAWLPSLLLAPFLAFFFL
RDGRRFKKFIIHAVPNAFLERTLYLLDEVDRTARMYFTGLLKLTLLDTLTLALGLWALGI
SAPFLLGLVTAVLAWVPYVGSILGCALVVLVAATDFPGNPGMAYGAIGLFILVRLLDDFF
FMPMTVGRSLHLHPLLTVIMIFVGGAVAGISGLMLVLPLLGVVMVLGETVGQVVNDPRLQ
ARHAHARRLRHAAVTGDLL