Protein Info for Dsui_2389 in Dechlorosoma suillum PS

Annotation: putative membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 423 transmembrane" amino acids 12 to 29 (18 residues), see Phobius details amino acids 41 to 58 (18 residues), see Phobius details amino acids 64 to 82 (19 residues), see Phobius details amino acids 94 to 111 (18 residues), see Phobius details amino acids 117 to 134 (18 residues), see Phobius details amino acids 146 to 164 (19 residues), see Phobius details amino acids 179 to 197 (19 residues), see Phobius details amino acids 208 to 226 (19 residues), see Phobius details amino acids 238 to 259 (22 residues), see Phobius details amino acids 269 to 290 (22 residues), see Phobius details amino acids 310 to 330 (21 residues), see Phobius details amino acids 339 to 361 (23 residues), see Phobius details amino acids 375 to 395 (21 residues), see Phobius details amino acids 403 to 421 (19 residues), see Phobius details PF02308: MgtC" amino acids 18 to 135 (118 residues), 63.5 bits, see alignment E=2.6e-21 PF13194: DUF4010" amino acids 184 to 394 (211 residues), 210.6 bits, see alignment E=2.2e-66

Best Hits

KEGG orthology group: None (inferred from 52% identity to net:Neut_0130)

Predicted SEED Role

"MgtC family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLV9 at UniProt or InterPro

Protein Sequence (423 amino acids)

>Dsui_2389 putative membrane protein (Dechlorosoma suillum PS)
MENNFLTETGLEFAQAFLLSLGVGLLMGLERERHSSSRAGLRTFALTALLGTIAGLLGEK
SGSEWVLAAGLLMVGLMMVAAYHSRPDAQDPGTTSVVALLLAYTFGAMIWYQEQTLAVML
AILTTVLLYFKTELHLLSEKLTRKDLISMLQFGVLSLVILPILPDQGFGPYLALNPYQVW
WMVVLISGMSLAGYAALRLFGQQHGAPLIGLMGGLASSTAITLVYSRHVKATPNLLRLSM
VVILTANVVVLVRLSLLAAMLQPELLPQLLPALGGGLLLGLVVIGWLWRILGDQSGQPET
PLNLHNPAEIRTALTFGCIYAVVLLLAAWLSDVAGSEGLYAISLISGFTDVDAIALSSLR
LFGMGKLPMHEAVNSIVIAFLANLVFKLGIVFSVAGPSLGRRIGLGFLALAAGTIGGWIF
MHL