Protein Info for Dsui_2247 in Dechlorosoma suillum PS

Annotation: cytochrome b

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 transmembrane" amino acids 29 to 47 (19 residues), see Phobius details amino acids 53 to 76 (24 residues), see Phobius details amino acids 114 to 136 (23 residues), see Phobius details amino acids 152 to 173 (22 residues), see Phobius details amino acids 199 to 218 (20 residues), see Phobius details PF01292: Ni_hydr_CYTB" amino acids 24 to 185 (162 residues), 102.2 bits, see alignment E=1.5e-33

Best Hits

KEGG orthology group: None (inferred from 57% identity to rpi:Rpic_0574)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QKC7 at UniProt or InterPro

Protein Sequence (219 amino acids)

>Dsui_2247 cytochrome b (Dechlorosoma suillum PS)
MTIHDQQRCTAAKATDAGPGKILVWDVPVRLFHWSLALAFTTAFITSESERWQLIHIASG
YVVAALIVFRLLWGLVGSRYARFSQFVRGQTAIREYLLGMLRLRPPHYTGHNPAGALAVL
ALLGLGLLTAATGWMTFNEVAGDWLEEIHEGVASAMLGLVFVHVAAVLWSSLLHRENLVA
AMWHGYKQGRPEDGIARRHLPVAVGLLALIGGAIALALA