Protein Info for Dsui_2182 in Dechlorosoma suillum PS

Annotation: arabinose efflux permease family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 transmembrane" amino acids 46 to 69 (24 residues), see Phobius details amino acids 84 to 105 (22 residues), see Phobius details amino acids 113 to 131 (19 residues), see Phobius details amino acids 137 to 159 (23 residues), see Phobius details amino acids 176 to 197 (22 residues), see Phobius details amino acids 203 to 223 (21 residues), see Phobius details amino acids 242 to 266 (25 residues), see Phobius details amino acids 279 to 306 (28 residues), see Phobius details amino acids 318 to 335 (18 residues), see Phobius details amino acids 341 to 359 (19 residues), see Phobius details amino acids 380 to 399 (20 residues), see Phobius details amino acids 406 to 429 (24 residues), see Phobius details PF07690: MFS_1" amino acids 53 to 368 (316 residues), 125 bits, see alignment E=1.8e-40

Best Hits

KEGG orthology group: None (inferred from 63% identity to dar:Daro_1885)

Predicted SEED Role

"Fosmidomycin resistance protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QJS4 at UniProt or InterPro

Protein Sequence (434 amino acids)

>Dsui_2182 arabinose efflux permease family protein (Dechlorosoma suillum PS)
MGTDSNAAVASPEPVALAAAVTDTTAAPAGAEAGETARLQRRREYATISVVGFAHGVSHF
FHLLLAPLFPWLMQEFGLSFTQVGANMTLFFVVSGIGQALAGFAVDRLGARRVLFFGVSC
LAAAGVALALAHSYAGLFLAAGLAGLGNAVFHPADFTLLNRHVSAARLGHAFSIHGLSGN
LGWAAAPAFLTGIAALAGWRGAALGAGAVALLALGLLVCFRHLLADPPHGASRHDGAPGS
PFAFLGCGPVWLCFGFFLFTTTAFGAFQNFGSPVLQQVYGLTVGLAASAITAFLLGGAGG
MALGGFLAGKAMAHDRRIALILSTAALLALLLASGVVPGALVPLLMACIGFCNGLAGPSR
DLLVRRAAAARFGQQAFGRVYGFVYSGLDTGLALSPLLFGPMLDAGHFASVLVGVAILQS
IAVLTALGVGQRQV