Protein Info for Dsui_2128 in Dechlorosoma suillum PS

Annotation: uncharacterized protein involved in outer membrane biogenesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1073 transmembrane" amino acids 40 to 58 (19 residues), see Phobius details PF05359: DUF748" amino acids 29 to 426 (398 residues), 243.8 bits, see alignment E=3.9e-76 amino acids 316 to 1047 (732 residues), 741.3 bits, see alignment E=2.2e-226

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QJ80 at UniProt or InterPro

Protein Sequence (1073 amino acids)

>Dsui_2128 uncharacterized protein involved in outer membrane biogenesis (Dechlorosoma suillum PS)
MTASAPRQNNDLSTRLQAGLQHLQPRLQAFARHRRVRQGAWGLGIFLVLFGLLGYFWLPG
FAKAKLESLLAEEFERPVRIERIQVSPYTLSATISGFAVGQRGADASVPAEQRLLGFDSL
HVNVSSMSLARGIPVVSEVKLVGPYVHLVREEGNRYNISDLIEKWTEKPSEGPPPKFSVA
NIAVEGGRIDFDDRPVKVSHHITDLALGIPFLANTPGTVESFVEPHFAAKLNGAPLSLGG
KLRPFAPGKDAVVDVEIRDFDLAGVDAYIPANIPLTVTAAKLEGDLAVTFSQAEGQAPSV
GLSGDLGIKGVAAKGNKVGLQVGAIQLGIQRATLDDAKGVDLKLAVRDLAFSRDGEKQPF
LGFSALTLDGVSVNLVSRQAKVAGITLENPQAGVRRLKGGEVDLLQSLAALAPTPAAPTK
AAPAKAPAKVGGTAGAAKVPAPWGWQVAQVRVGGGKLRYTDDNLEKVPPLSVDGLDLHVA
GLSSAAGSRSQIGIEARINEQGRFKVEGAAALAPLAADLQLDLEQVNLVALQGLAAEQLN
ALLTKGDLTVKGKLKVAAGAAGAAPGVAFDGDVNLTDFNVLDKLNATDLLRWRSLRLTGV
EAGSVPPRFAVSEIAITSFYARAILSPEGRLNLQDIVRQDEGAKPAAAAPAASAAAVPAT
PAAAPAPVAAPAKPAGPAPQIRIGKVVLAGGNINFTDRFIKPNYSANLTDLSGRIGTLAA
GKPAELLIRGKVDRTAPLDISGKIDPLGSPIALDVQAKARGIEMSSFTPYSGRYLGYTIE
KGKLSVDVQYKVEKGELQAQNKIFIDQLTFGDKVESPNALGIPIGLVVALLKNSRGEIDL
NLPVQGSLNDPQFSIGGIVGKMILNLLTKAVTSPFTLLSSLFGGGEELSYVAFDAGHARI
TPEVEKRLETIAKALRERPALELEITGTADPAAEQEGLKRAILERKVRAQKLAEQAKGGK
ASGSIAAVTVSAEEYPRYLEKAYKEESFKKPRNFIGLTKSLPVAEMEALMLANIPAEEEE
MRQLAQRRGTAVQTWLVEKGGIAAERLFLLSPKVGGEAPKGAPVGGRVDFSLQ