Protein Info for Dsui_2037 in Dechlorosoma suillum PS

Annotation: putative alpha/beta hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 transmembrane" amino acids 118 to 141 (24 residues), see Phobius details amino acids 161 to 179 (19 residues), see Phobius details PF12146: Hydrolase_4" amino acids 37 to 128 (92 residues), 49.6 bits, see alignment E=3.5e-17 PF00561: Abhydrolase_1" amino acids 41 to 129 (89 residues), 33.1 bits, see alignment E=4.9e-12

Best Hits

KEGG orthology group: None (inferred from 49% identity to sno:Snov_3764)

Predicted SEED Role

"Hydrolases of the alpha/beta superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QIJ6 at UniProt or InterPro

Protein Sequence (315 amino acids)

>Dsui_2037 putative alpha/beta hydrolase (Dechlorosoma suillum PS)
MDRFTPPPPTVSASPLSLTAADGYLLAAHHWQPEGVPRAVVVINPATAVKAAYYHRYARF
LAENGYAVLTYDYRGIGDSRQGSLRRWRHVSKLDWGRYDCEAALAWARQTYPDLPLHLVA
HSIGGLLLGLAPSGAAVQRAFTVGSQYAYWPDYGPGKPLMWLRWHVLMPLLTAVLGYFPA
RRLGWHEDLPAAAAYEWAFRPASLEKSYRRHVRGGADPLAHFDGFRGEMLAVSITDDPFG
TPAAIRRLLGYYRGARRHHVHLSPAAAGVEAIGHFAWFHERFRPTLWQDSLAWLEDGSLT
RPPRETLAPETGAGA