Protein Info for Dsui_2017 in Dechlorosoma suillum PS

Annotation: ATPase family protein associated with various cellular activities (AAA)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 371 PF13191: AAA_16" amino acids 31 to 171 (141 residues), 39.3 bits, see alignment E=3e-13 PF04851: ResIII" amino acids 40 to 192 (153 residues), 25.1 bits, see alignment E=4.6e-09 PF13401: AAA_22" amino acids 45 to 210 (166 residues), 71.5 bits, see alignment E=2.7e-23 PF00004: AAA" amino acids 48 to 225 (178 residues), 22 bits, see alignment E=6e-08 PF05621: TniB" amino acids 144 to 229 (86 residues), 44.8 bits, see alignment E=2.9e-15

Best Hits

KEGG orthology group: None (inferred from 39% identity to mmb:Mmol_0480)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QIH6 at UniProt or InterPro

Protein Sequence (371 amino acids)

>Dsui_2017 ATPase family protein associated with various cellular activities (AAA) (Dechlorosoma suillum PS)
MNMNDLQQDPITSAIAGFSGHIFAHPHAAATFRDLMDAISADSLPQIVIITGPTGVGKTT
LIQALVDKMVERYLPRIAAETDFVPIVSVDAIPPCATNFSWKDFYIRLLTGQNEPLVNRK
LLISRQLTLFPEHPAANPLEQSVTDALRRSAEEYLKRRRTKLLIIDEAHHLLLVTNRQRL
ENQFESLKILAMKTGTTIVLVGTYRLLDILDQSGQLSRRSQVINFPRYDTRKKSDQGEFR
KALAFFELLLSKHIPTSLNQEAAYFYMKSAGCIGILKDWLTRCLEHALREEAQRIDAAFA
ERYALKNRALVTIVEEACWGEQKLSDVDDLKLRDLLENGVLLSSKEPFGQGTSRRIGKRK
PVRDPVGGIRP