Protein Info for Dsui_2012 in Dechlorosoma suillum PS

Annotation: Peptidase U49

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 584 PF10463: Peptidase_U49" amino acids 96 to 264 (169 residues), 38.1 bits, see alignment E=6.7e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QIH1 at UniProt or InterPro

Protein Sequence (584 amino acids)

>Dsui_2012 Peptidase U49 (Dechlorosoma suillum PS)
MPPREDEQVNTAVRNILLGSAPERESELASLWSLLEPRFQLTADTHDGERLVMEAGMYRF
VRFNHRVVRAFWIAGFAAWEAYRVVAESPELEPLELKRLVELIDAFERVLESDAPELEAL
PKDVPEPGHYDDSPQLRAPGELATLGVGWALLHEVRHLKHQQDGDAADSYGEDPTQRRNE
ELSCDTFATKFLLDQLDAYAQRENVSPNLVRRKRELGIYFALFAMTLMARDKWGASQTHP
SIQARIDAVHALMGSQRDEVAEAIASVAFATLHELMPGSPGIVSTRKNVDSPMHKKDFAG
EPILKEMSCVLEWLKGKGLNALNSRYSRYEKDIDQFFSCDDPTSADGRAKFDKLTNSYIE
CLNIVLIHRAFRDEASQGFVDRLSKVADGQDHPDASSAGTSRDFLFELLIAARMSLSGYK
IDFNKVTDVVAEDDEFLVFGECKRLSSEKKFEENFKKAGKQITAQAAEMSQRVYGLVFLD
VSSCLDGIPKMELPNVEAAQRAIHESLEAFVARNASKIEQLAERFSESSLGVCLIGQAPI
WTRDGTLYMATRTRVVAPQSLSDEDFNSLNKILGRFSTSMLSLV