Protein Info for Dsui_1694 in Dechlorosoma suillum PS

Annotation: AAA ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 432 PF05496: RuvB_N" amino acids 11 to 121 (111 residues), 40.9 bits, see alignment E=7.7e-14 PF07728: AAA_5" amino acids 44 to 122 (79 residues), 23 bits, see alignment E=2.8e-08 PF00004: AAA" amino acids 44 to 152 (109 residues), 56.4 bits, see alignment E=1.8e-18 PF16193: AAA_assoc_2" amino acids 175 to 251 (77 residues), 75.6 bits, see alignment E=1.2e-24 PF12002: MgsA_C" amino acids 252 to 418 (167 residues), 217.8 bits, see alignment E=3.4e-68

Best Hits

KEGG orthology group: K07478, putative ATPase (inferred from 86% identity to dar:Daro_1298)

Predicted SEED Role

"FIG065221: Holliday junction DNA helicase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QFL4 at UniProt or InterPro

Protein Sequence (432 amino acids)

>Dsui_1694 AAA ATPase (Dechlorosoma suillum PS)
MDAGAPLAEQLRPRAPDEVIGQQHLLGPGKPLRLAFESGQPHSMILWGPPGVGKTTLARM
MATQFNCEFIALSAVFSGIKEVREAVAQAEMWKAQGKRTILFVDEIHRFNKAQQDGFLPF
VESGLFTFIGATTENPSFEVNSALLSRASVYVLKSLDEAEMGQLFDRARDKALAELDFDD
EARTRLIGLADGDARRFLNLLEQVRTAARTARLAKVDGAFIEATMAQSLRRFDKGGDAFY
DQISALHKSVRGSNPDGALYWFCRMLDGGADPRYLARRIVRMAWEDIGLADPRGSEIAMN
AAQTYERLGSPEGELALAQAVIYLACAAKSNAAYNAYNAARAFVAKDGSRPVPEHLRNAP
TKLMKDLGYGKDYRYAHDEAEGYAAGENYFPDGMAPATWYQPVERGLEIKIGEKLAHLRD
LDAQAARKGKKG