Protein Info for Dsui_1472 in Dechlorosoma suillum PS

Annotation: deoxynucleoside kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 224 PF13238: AAA_18" amino acids 16 to 155 (140 residues), 34.2 bits, see alignment E=6.6e-12 PF01712: dNK" amino acids 16 to 209 (194 residues), 121.8 bits, see alignment E=6.6e-39 PF13671: AAA_33" amino acids 16 to 161 (146 residues), 27.3 bits, see alignment E=8.1e-10 PF02223: Thymidylate_kin" amino acids 18 to 178 (161 residues), 35.4 bits, see alignment E=1.8e-12

Best Hits

KEGG orthology group: K10353, deoxyadenosine kinase [EC: 2.7.1.76] (inferred from 60% identity to har:HEAR2640)

Predicted SEED Role

"Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)" in subsystem Purine conversions or PnuC-like transporters (EC 2.7.1.113, EC 2.7.1.76)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.113 or 2.7.1.76

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QNM2 at UniProt or InterPro

Protein Sequence (224 amino acids)

>Dsui_1472 deoxynucleoside kinase (Dechlorosoma suillum PS)
MPGTPARNLLEHARNIVVEGPIGVGKTSLARRLAEHLGQSKECQLLLEQPELNPFLTRFY
QERSRYALQTQLFFLFQRQDQLRDLAQPDIFRQTVVSDFLFEKDPIFARLTLAEDEYKLY
RQIYDTLAPQVVSPDLVIYLQASPENLIARVKKRGLDMERRIGDVYLTQLAESYSRFFYG
YNAAPVMIVNSDRLNFVDQDRDFHLLLERLAAMRGHREYFNRGE