Protein Info for Dsui_1106 in Dechlorosoma suillum PS

Annotation: nitroreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 230 PF00881: Nitroreductase" amino acids 13 to 205 (193 residues), 133 bits, see alignment E=1.2e-42

Best Hits

KEGG orthology group: None (inferred from 68% identity to bug:BC1001_4704)

MetaCyc: 45% identical to 4-nitrobenzoate reductase (Pseudomonas putida TW3)
1.7.1.-

Predicted SEED Role

"Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-)" (EC 1.-.-.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.-.-.-

Use Curated BLAST to search for 1.-.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QK75 at UniProt or InterPro

Protein Sequence (230 amino acids)

>Dsui_1106 nitroreductase (Dechlorosoma suillum PS)
MTTDRQRLVDETIDSRRSVRAFLPTPVPRETLEEILRISSRAPSGTNVQPWKVYVLTGNA
KDQLSQKILAAYNDPEEAQTHTEEYPYYPAKWVSPYIDRRRKVGLDLYGLLDIKKGDAAR
MHAQHGRNYTFFDAPVGLIFTIDRIMQQGSWFDYGMFVQTIMLAARARGLDTCPQAAFTQ
FHRIIGEQLNLPENEMVVCGMALGYADESKPENKLRTERAPLEEWVRFCD