Protein Info for Dsui_1043 in Dechlorosoma suillum PS

Annotation: quinolinate synthetase complex, A subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 365 TIGR00550: quinolinate synthetase complex, A subunit" amino acids 17 to 365 (349 residues), 300.8 bits, see alignment E=5.6e-94 PF02445: NadA" amino acids 21 to 362 (342 residues), 325.9 bits, see alignment E=1.1e-101

Best Hits

Swiss-Prot: 56% identical to NADA_HERA2: Quinolinate synthase A (nadA) from Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785 / 114-95)

KEGG orthology group: K03517, quinolinate synthase [EC: 2.5.1.72] (inferred from 83% identity to azo:azo0741)

Predicted SEED Role

"Quinolinate synthetase (EC 2.5.1.72)" in subsystem NAD and NADP cofactor biosynthesis global or NAD regulation (EC 2.5.1.72)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.72

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QJM0 at UniProt or InterPro

Protein Sequence (365 amino acids)

>Dsui_1043 quinolinate synthetase complex, A subunit (Dechlorosoma suillum PS)
MQATIQFDRFNQMADADCQERIRAARAKLGKKAVLLCHHYQRADVYQHADLTGDSLKLSR
LASQTDAEYIVFCGVHFMAEVADIMSKPEQIAILPDLAAGCSMADMANLAKVERCWRELN
EVLGNAESLVTPVTYINSAADLKAFCGERGGIVCTSSNAGTIAKWAFAQREKVLFFPDQH
LGRWTGHNMDIPMEQMVVWDPDQEYGGLTPQQIKEAKILLWKGHCSVHQMFQPAHIQRFR
QEHPDGLVISHPECCFDVCKASDYVGSTEHIVKTIKEAAPNTRWLVGTELNLVNRLAEEV
KAEGKIVQFMAPTVCMCSTMQRIDPQHLAWTLENLAEGNVVNRISVPAHEAPMAKLALDR
MLAIS