Protein Info for Dsui_1002 in Dechlorosoma suillum PS

Annotation: prolyl oligopeptidase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 304 transmembrane" amino acids 6 to 27 (22 residues), see Phobius details amino acids 63 to 84 (22 residues), see Phobius details amino acids 149 to 165 (17 residues), see Phobius details amino acids 171 to 188 (18 residues), see Phobius details amino acids 190 to 191 (2 residues), see Phobius details PF02129: Peptidase_S15" amino acids 69 to 184 (116 residues), 39.1 bits, see alignment E=3e-13 PF01738: DLH" amino acids 71 to 251 (181 residues), 29.8 bits, see alignment E=1.8e-10 PF12146: Hydrolase_4" amino acids 76 to 194 (119 residues), 55.6 bits, see alignment E=2e-18 PF00561: Abhydrolase_1" amino acids 76 to 192 (117 residues), 46.2 bits, see alignment E=1.9e-15 PF12697: Abhydrolase_6" amino acids 80 to 270 (191 residues), 41.7 bits, see alignment E=8.8e-14 PF00326: Peptidase_S9" amino acids 128 to 289 (162 residues), 46.3 bits, see alignment E=1.5e-15

Best Hits

KEGG orthology group: None (inferred from 54% identity to pna:Pnap_2823)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QJI2 at UniProt or InterPro

Protein Sequence (304 amino acids)

>Dsui_1002 prolyl oligopeptidase family protein (Dechlorosoma suillum PS)
MDTGQWLLPSLGAALALLLGRAGLHWAIRRGLQVPMVPEQGSPGDLGLPFRECAIAGPRG
KRLFAWMIPAATAAAPTVAVLHGWGGNAEMMLPLAAPLHRAGYAVLLLDARSHGRSEADT
FASLPRFAEDLEAALDWLPGQPEADGRRLAVLGHSVGAGAALLVASRRDGLAAAVSVAAF
AHPAAMMRRWLRALHIPYLPLGWYILRYVERTIGHRFDAIAPMRSIARARCPVLLVHGDA
DDTVPLAEARAILAARGDTAAELLVVPGSHDSYGEVEEQMPRLLEFLAAHLHPGEAGPAT
PGAS