Protein Info for Dsui_0845 in Dechlorosoma suillum PS

Annotation: response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 565 PF00072: Response_reg" amino acids 23 to 137 (115 residues), 59.2 bits, see alignment E=1.5e-19 PF13432: TPR_16" amino acids 150 to 207 (58 residues), 16.2 bits, see alignment 4.5e-06 amino acids 224 to 278 (55 residues), 22.6 bits, see alignment 4.5e-08

Best Hits

KEGG orthology group: None (inferred from 56% identity to app:CAP2UW1_4462)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QI91 at UniProt or InterPro

Protein Sequence (565 amino acids)

>Dsui_0845 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains (Dechlorosoma suillum PS)
MDANELAAQQLYKLQGELKNKKVLVVDRHPDARNAMRMMLSTIGITSVQGVGSATEVLRL
VKSSSYDIILSDYQLEDGRDGQQLLEELRYKRLISLSTLFMVVTGERAYKNVVSVAELAP
DDYLIKPFTGEQLQQRLARALYKKFVFHQAYRNVERSRYEDAVTACDDIIQQYPQYQHDA
RHLQADLLNSLGRYVEAEAAYRQMLEQKDLAWARMGVAVAVHGQGRVDEAVTQLEALVQD
FPEYLAAFDFLARLREEKGDSTGAQQALQAAAAISPNNTMRQRAVGDMAVRNNDLEAAER
AYNTVLSRARGSSLRSIDDYANLSRVMLEKGNVAGAKLVAQDLRRDWRGDKQGELASLVI
DSLVQTKEGAPDKAARSIAAAMELHKVLVAEGKMEEKRPLSQKVAVDLAHACMANGKEAD
AQSLLRQVAAENNEDRGVLAHIQGVFEKTGNAEAGKALLEDVSREIIQINNQGVLAARSG
DFDGSVQLLIEAAERVPNLQFLVNAAKSIYTLMDQKGWQPELAERAHRYLEKARSRSPDD
PRIISGRDMYQRVARKYGVQVDTDS