Protein Info for Dsui_0782 in Dechlorosoma suillum PS

Annotation: N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 319 transmembrane" amino acids 113 to 135 (23 residues), see Phobius details amino acids 200 to 219 (20 residues), see Phobius details TIGR01851: N-acetyl-gamma-glutamyl-phosphate reductase" amino acids 3 to 311 (309 residues), 431.3 bits, see alignment E=1.1e-133 PF01118: Semialdhyde_dh" amino acids 40 to 101 (62 residues), 36.2 bits, see alignment E=7.1e-13 PF22698: Semialdhyde_dhC_1" amino acids 118 to 292 (175 residues), 93.4 bits, see alignment E=1.5e-30

Best Hits

Swiss-Prot: 58% identical to ARGC_RALSO: N-acetyl-gamma-glutamyl-phosphate reductase (argC) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K00145, N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase [EC: 1.2.1.- 1.2.1.38] (inferred from 58% identity to rso:RSc0142)

Predicted SEED Role

"N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)" in subsystem Arginine Biosynthesis extended (EC 1.2.1.38)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.2.1.-

Use Curated BLAST to search for 1.2.1.- or 1.2.1.38

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QHN8 at UniProt or InterPro

Protein Sequence (319 amino acids)

>Dsui_0782 N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form (Dechlorosoma suillum PS)
MTFKVFIDGRHGTTGLKIDERLSIRPEIEILTIPEDKRKDPAVKAEYINSADVVFLCLPD
AASRESVALLAPGNTRTRFLDASTAHRTNPDWVYGLPELNGGQRERVAKAQKVAVPGCHA
SGFIMLMAPLVAGGIVPKDYPVSTYSITGYSGGGKEMIASYEEPASLPDAMKSPRFYALG
LTHKHLPEMQMQTGLAHQPLFTPIVGNFAQGMVVAVPLLPRMLGKKVTPADLQAFYSEYY
AGEVFVKVMPLDAAPVLDNGFLPATACNDTNRAEIFVFGHGEQILVASRFDNLGKGASGA
AIQCMNLMLGVDEATGLAV