Protein Info for Dsui_0672 in Dechlorosoma suillum PS

Annotation: 2-polyprenylphenol 6-hydroxylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 516 transmembrane" amino acids 495 to 514 (20 residues), see Phobius details TIGR01982: 2-polyprenylphenol 6-hydroxylase" amino acids 3 to 437 (435 residues), 588.7 bits, see alignment E=3e-181 PF03109: ABC1" amino acids 91 to 336 (246 residues), 277.1 bits, see alignment E=5.2e-87

Best Hits

Swiss-Prot: 69% identical to UBIB_RALSO: Probable protein kinase UbiB (ubiB) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K03688, ubiquinone biosynthesis protein (inferred from 77% identity to dar:Daro_3869)

Predicted SEED Role

"Ubiquinone biosynthesis monooxygenase UbiB" in subsystem Ubiquinone Biosynthesis

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QGK2 at UniProt or InterPro

Protein Sequence (516 amino acids)

>Dsui_0672 2-polyprenylphenol 6-hydroxylase (Dechlorosoma suillum PS)
MRLLRLAKIATVAIRYGLDQMVLEHEPTGRARGLSRLSRALFFWRDLDRRSEAERLRLAL
EALGPIFVKFGQVLSTRRDLLPPDLAEELAKLQDQVPPFPSEQAIAQVEAAYGKPLAEIF
AEFDPTPVASASVAQVHFARLHDGREVAVKVLRPGMKPVIGHDLALMDTLAGLTEKLWAD
GKRLKPREVVAEFAKHLYDELDLMREAANCSQLRRNFENSPLLLVPEVHWDYCTPSVMVM
ERMHGIPISQTQRLQAQGTDLKALSRAGVEIFFTQVFRDGFFHADMHPGNIFVHADGRYI
ALDFGIVATLNDNDKNYLAQNFLAFFRRDYKRVAEAHIESGWAPADTRVDELEAAIRAVC
EPIFDRPLKDISFGKLLLRLFQTSRRFNVEIQPQLVMLQKTLLNIEGLGRQLDPDLDLWK
TAKPFLEKWMESQMGWRGFVRNLKNEAPYWARSLPQIPRLAQQALAAQARAPEAGVATQA
ALAAIQATQARHERWLRLALLLAAGIFALEIFRSLG