Protein Info for Dsui_0650 in Dechlorosoma suillum PS

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 226 transmembrane" amino acids 90 to 101 (12 residues), see Phobius details PF04340: DUF484" amino acids 7 to 222 (216 residues), 129.4 bits, see alignment E=8.7e-42

Best Hits

KEGG orthology group: K09921, hypothetical protein (inferred from 71% identity to dar:Daro_0193)

Predicted SEED Role

"Protein of unknown function DUF484"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QGI1 at UniProt or InterPro

Protein Sequence (226 amino acids)

>Dsui_0650 hypothetical protein (Dechlorosoma suillum PS)
MSDIQTPRLSGADVAEYLEHNPQFFEEHADLISRLVIPHPHGGRAISITERQMLTLRDKN
KALEGKMAELLGFGEANDAISEKMHRLAVALVAATTFQAVIHILDFHLKEDFAIPHVALR
LWDQPEGVGELPEFAAVSEELQVFAETLGRPYCGSTSGFETSTWFGDTSAHIRSQALVAL
RNGGGTFGMIAMGSESMDRFYADMGTLYLERLGEIVSAAIGRALRH