Protein Info for Dsui_0125 in Dechlorosoma suillum PS

Annotation: NAD-dependent aldehyde dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 245 transmembrane" amino acids 136 to 157 (22 residues), see Phobius details PF00171: Aldedh" amino acids 28 to 118 (91 residues), 45.9 bits, see alignment E=1.5e-16 amino acids 137 to 224 (88 residues), 74.7 bits, see alignment E=3e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QM32 at UniProt or InterPro

Protein Sequence (245 amino acids)

>Dsui_0125 NAD-dependent aldehyde dehydrogenase (Dechlorosoma suillum PS)
MMLTPNEAPALPLWIGGRAYLTMAPVFRDIQNAAGEVLRKVPLCGADEVATAVDNARLAL
PTWSAADVETRRGCLKSVADSLDRYAGHFAKLLVEETGCDQGVAQAEVAATIACLRQMPA
PHGQPRLVAGLSDNVAPLLAPAALAASALAAGAVVVLKPSPLAPSCALALAELFTRAGVP
DGACNLVQGDEAVLKALAEHPGVDLLAFAGAAELAEKIQSLIGARTLVALAPAAVTGTLQ
AALQD