Protein Info for CSW01_17095 in Vibrio cholerae E7946 ATCC 55056

Annotation: protein acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 893 PF13380: CoA_binding_2" amino acids 11 to 137 (127 residues), 72.5 bits, see alignment E=1.5e-23 PF13607: Succ_CoA_lig" amino acids 153 to 290 (138 residues), 168.9 bits, see alignment E=1.8e-53 PF19045: Ligase_CoA_2" amino acids 302 to 437 (136 residues), 27.2 bits, see alignment E=1.3e-09 PF13549: ATP-grasp_5" amino acids 489 to 706 (218 residues), 230.3 bits, see alignment E=6.7e-72 PF13302: Acetyltransf_3" amino acids 738 to 875 (138 residues), 31.7 bits, see alignment E=8e-11 PF00583: Acetyltransf_1" amino acids 768 to 875 (108 residues), 40.9 bits, see alignment E=7.8e-14

Best Hits

KEGG orthology group: K09181, hypothetical protein (inferred from 100% identity to vch:VCA0574)

Predicted SEED Role

"Protein acetyltransferase" in subsystem Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (893 amino acids)

>CSW01_17095 protein acetyltransferase (Vibrio cholerae E7946 ATCC 55056)
MDHLNQLLRPKSVAVIGASVRSFRAGNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKT
ISDLPIVPDIAILCTHASRNVSLFKQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIA
KSVNMRILGPNSLGLILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGF
SAFISLGNASDIDFADLLDTLSTDKHTDAILLYVDTIRDARRFMSAARAASRNRRILVLK
GGRTKAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETLTHSVPLRGER
LAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIVGDADHLR
YVSTLNILLESENIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILTNWSGELS
AKPARTLFNQAGIPTYRTPESAVTAFMHLVEYRRNQKHLMETPTTTEVVHASEMQTAKSW
IHEHLGEHDQVNLDTHQIGTLLKCFNFNVLPTWIASDSTEAVHIAETIGYPVAVKLRSPD
IAHKSDVQGVMLNLRNRIEVANAAQAILDRTQLSYPSANIHGLLVQGMAKLAGGEELRIK
VKTDATFGPVILLGQGGSEWDESLDAAAALPPLNMTLARYLIVRAIRSGKIRLQKLPVPI
DIEGLSEFLVRISQMVVECPQVHELDIHPLLVNGSQFTILDANLVLRQFTGDAQSRLAIR
PYPTELEERCQARDGEWLTVRPILPEDEPKHAAFIKKVSKEDLYKRFFSDVGEFNHEALA
NLTQIDFDREMAFVAVSGEGEDSEIIGVSRALINHENTDAEFAILIRSDLKGKGLGKILM
RKIIDYCKAKGTQQMSGMTMPTNRGMLTLAQKMGFAVDIHFEDGTADMVLPLR